bwa

A modern compressor for genomic files (FASTQ, SAM/BAM/CRAM, VCF, FASTA, GFF/GTF/GVF, 23andMe...), up to 5x better than gzip and faster too

NGLess: NGS with less work

Detecting contamination in NGS data and multi-species analysis

Docker for 4DN Hi-C processing pipeline

Home Assistant integration - Spa Client

Whole Exome/Whole Genome Sequencing alignment pipeline

Accelerated short-read alignment, derived from bwa-mem2 — drop-in replacement with correctness fixes, performance improvements, single-binary methylation, and shared-memory index.

Nextflow Alignment Pipeline - from fastq.gz to sorted bam/cram with ease

secondary analysis pipelines parallelized with apache spark

Nextflow pipeline for BWA, BWA2 and STAR alignments

Analysis pipeline for processing paired-end Illumina reads obtained after ancient mtDNA target enrichment capture.

Scalable and High Performance Variant Calling on Cluster Environments

Open-source AI-powered bookkeeping automation for German businesses. Auto-classify transactions (SKR03/SKR04), generate journal entries, create BWA reports, and export DATEV-compatible files. Rules-first, LLM-assisted, human-supervised.

Binding for bwa

Ini adalah project Server-Side dari kelas BWA MERN 2021

The DKFZ alignment workflow plugin originally developed at the eilslabs

Ini adalah project Client-Side dari kelas BWA MERN 2021

JNI code for bwa mem

Rust FFI crate for bwa-mem3 with packed-BAM output and caller-owned parallelism