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Bugfix: parsing of mmCIF files with empty database_PDB_rev.date #1129

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Merged
josemduarte merged 1 commit into from
Jul 30, 2026
+7 −1
Merged

Bugfix: parsing of mmCIF files with empty database_PDB_rev.date #1129

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5 changes: 5 additions & 0 deletions CHANGELOG.md
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Original file line number Diff line number Diff line change
@@ -1,6 +1,11 @@
BioJava Changelog
-----------------

BioJava 7.2.6
==============================
### Fixed
* Parsing of PDBx/mmCIF with empty database_PDB_rev.date

BioJava 7.2.5
==============================
### Fixed
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3 changes: 2 additions & 1 deletion ...a-structure/src/main/java/org/biojava/nbio/structure/io/cif/CifStructureConsumerImpl.java
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Expand Up @@ -630,7 +630,8 @@ public void consumeDatabasePDBRev(DatabasePDBRev databasePDBrev) {
modDate = relDate;
} else {
String dbrev = databasePDBrev.getDate().get(rowIndex);
modDate = convert(LocalDate.parse(dbrev, DATE_FORMAT));
if (dbrev != null && !dbrev.isBlank())
modDate = convert(LocalDate.parse(dbrev, DATE_FORMAT));
}
pdbHeader.setModDate(modDate);
}
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