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biojava
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biojava
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History for
biojava
biojava-core
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bugfixes-5.4.x
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Commits on Jun 29, 2020
[maven-release-plugin] prepare for next development iteration
josemduarte
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[maven-release-plugin] prepare release biojava-5.4.0
josemduarte
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Commits on Jun 11, 2020
refactored code to use java 8 streams
balaji-s
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Commits on May 8, 2020
Forgot to forward the parameter.
paolopavan
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Commits on Apr 27, 2020
Usually expected preceeds tested
paolopavan
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Commits on Apr 26, 2020
fixed failing unit test
paolopavan
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Fixed failing unit test for sequence lengths not compatible with integer. This fix should be propagated to Location class and related.
paolopavan
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Improved unit test
paolopavan
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even better location management
paolopavan
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Commits on Apr 25, 2020
Modified the exception to take in account this particular case
paolopavan
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Implementation of exceptional complex location in case of location spanning the end point. Location contract wants sublocations
paolopavan
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Need to propagate down also this bit of information. Since two parameters more may be less readable I changed strategy and configured parser class.
paolopavan
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Need to extract also the sequence length to correctly create two locations spanning sequence end.
paolopavan
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Propagate down this bit of information
paolopavan
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retrieve information of circular sequence
paolopavan
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Added basic integration test to demonstrate the issue
paolopavan
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Added sequence file mentioned in #855
paolopavan
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0570329
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Commits on Sep 6, 2019
[maven-release-plugin] prepare for next development iteration
josemduarte
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9be998f
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[maven-release-plugin] prepare release biojava-5.3.0
josemduarte
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c2335df
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Commits on Jun 23, 2019
Merge branch 'master' into uniprot-sequence-space-fix
emckee2006
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6cbbec5
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Commits on Jun 8, 2019
Update UniprotProxySequenceReader.java
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emckee2006
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Commits on Jun 7, 2019
Update UniprotProxySequenceReader.java
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Commits on Jun 6, 2019
Update UniprotProxySequenceReader.java
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emckee2006
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390e6b3
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Commits on Jun 5, 2019
Update UniprotProxySequenceReader.java
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emckee2006
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Commits on May 2, 2019
Fixing #837
josemduarte
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59e51fd
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Hoping to fix LF/CRLF problems causing 4 files to be shown as modified by git
josemduarte
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a13fc64
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Commits on Apr 24, 2019
Merge pull request #835 from jamesmorris/issue833
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josemduarte
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Commits on Apr 23, 2019
Declaring specific exceptions and moved test resources into testing
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kslb056
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kslb056
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Commits on Apr 21, 2019
Update GenbankReaderTest.java
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jamesmorris
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bb0d3fe
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Commits on Apr 18, 2019
Update GenbankReaderTest.java
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Update GenbankReaderTest.java
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Update uppercase_locus4.gb
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Commits on Apr 17, 2019
Update GenbankReaderTest.java
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Update uppercase_locus0.gb
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Update uppercase_locus1.gb
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