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biojava
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biojava
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Commits on Apr 19, 2017
Dak’s new unit test that demonstrates a problem when parsing FASTA files
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Commits on Apr 13, 2017
Merge pull request #658 from valasatava/alignment
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Exposing alignment mappings to be able to map query sequence to target sequence
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Commits on Apr 11, 2017
Merge pull request #657 from andreasprlic/master
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now using multiple names for specifying ossrh server - this is due to the inheritance in pom.xml from oss-parent (from sonatype)
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Merge pull request #656 from andreasprlic/master
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another attempt at fixing Travis deployments to ohs sonatype
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Merge pull request #654 from valasatava/master
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Merge branch 'master' of https://github.com/valasatava/biojava
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Jronn disorder scores calculation: handling sequences containing the selenocysteine (Sec) amino acid.
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Commits on Apr 10, 2017
Merge pull request #2 from andreasprlic/fix654
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Commits on Apr 7, 2017
Work with assemble hg19 or hg37 keyword
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Get CDS ranges patch
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Commits on Apr 6, 2017
now with profile for ossrh
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now configuring global env via travis
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Update .travis.yml
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Merge branch 'master' of github.com:valasatava/biojava
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Update .travis.yml
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Merge pull request #655 from andreasprlic/fixSIFTS20170405
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Commits on Apr 5, 2017
updating travis-settings.xml to include <settings> section
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setting the .m2 directory to get cached.
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moving SIFTS unit test to parse local file, since file from remote location has changed (and seems to contain inconsistent data)
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Get CDS ranges patch
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Commits on Apr 4, 2017
Merge pull request #653 from andreasprlic/master
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trying to get travis to run after_success stage
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Merge pull request #652 from valasatava/master
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Merge pull request #650 from andreasprlic/master
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now correctly quoting strings
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re-created key for publishing to ohs sonatype
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TwoBitFile geneAssembly fix
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Merge pull request #651 from valasatava/master
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A class to download .2bit file
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Refactoring FileDownload util to be a part of biojava-core project
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now we’ll only compile if on the master branch
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Merge pull request #648 from andreasprlic/travis4snapshotbuilds
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