Skip to content
Navigation Menu
Sign in
Appearance settings
Platform
AI CODE CREATION
GitHub Copilot
Write better code with AI
GitHub Copilot app
Direct agents from issue to merge
MCP Registry
Integrate external tools
DEVELOPER WORKFLOWS
Actions
Automate any workflow
Codespaces
Instant dev environments
Issues
Plan and track work
Code Review
Manage code changes
Code Quality
Enforce quality at merge
APPLICATION SECURITY
GitHub Advanced Security
Find and fix vulnerabilities
Code security
Secure your code as you build
Secret protection
Stop leaks before they start
EXPLORE
Why GitHub
Documentation
Blog
Changelog
Marketplace
View all features
Solutions
BY COMPANY SIZE
Enterprises
Small and medium teams
Startups
Nonprofits
BY USE CASE
App Modernization
DevSecOps
DevOps
CI/CD
View all use cases
BY INDUSTRY
Healthcare
Financial services
Manufacturing
Government
View all industries
View all solutions
Resources
EXPLORE BY TOPIC
AI
Software Development
DevOps
Security
View all topics
EXPLORE BY TYPE
Customer stories
Events & webinars
Ebooks & reports
Business insights
GitHub Skills
SUPPORT & SERVICES
Documentation
Customer support
Community forum
Trust center
Partners
View all resources
Open Source
COMMUNITY
GitHub Sponsors
Fund open source developers
PROGRAMS
Security Lab
Maintainer Community
Accelerator
GitHub Stars
Archive Program
REPOSITORIES
Topics
Trending
Collections
Enterprise
ENTERPRISE SOLUTIONS
Enterprise platform
AI-powered developer platform
AVAILABLE ADD-ONS
GitHub Advanced Security
Enterprise-grade security features
Copilot for Business
Enterprise-grade AI features
Premium Support
Enterprise-grade 24/7 support
Pricing
Type
/
to search
Sign in
Sign up
Appearance settings
You signed in with another tab or window.
Reload
to refresh your session.
You signed out in another tab or window.
Reload
to refresh your session.
You switched accounts on another tab or window.
Reload
to refresh your session.
Dismiss alert
{{ message }}
Uh oh!
There was an error while loading.
Please reload this page
.
biojava
/
biojava
Public
Notifications
You must be signed in to change notification settings
Fork
397
Star
629
Code
Issues
66
Pull requests
3
Actions
Security and quality
0
Insights
Additional navigation options
Code
Issues
Pull requests
Actions
Security and quality
Insights
Actions: biojava/biojava
Actions
All workflows
Workflows
Dependabot Updates
Dependabot Updates
Master Build
Master Build
PR Build
PR Build
Show more workflows...
Management
Caches
PR Build
PR Build
Actions
Loading...
Loading
Sorry, something went wrong.
Uh oh!
There was an error while loading.
Please reload this page
.
will be ignored since log searching is not yet available
Show workflow options
Create status badge
Create status badge
Loading
Uh oh!
There was an error while loading.
Please reload this page
.
pull_request.yml
will be ignored since log searching is not yet available
15 workflow runs
15 workflow runs
Event
Filter by Event
Sorry, something went wrong.
Filter
Loading
Sorry, something went wrong.
No matching events.
Status
Filter by Status
Sorry, something went wrong.
Filter
Loading
Sorry, something went wrong.
No matching statuses.
Branch
Filter by Branch
Sorry, something went wrong.
Filter
Loading
Sorry, something went wrong.
No matching branches.
Actor
Filter by Actor
Sorry, something went wrong.
Filter
Loading
Sorry, something went wrong.
No matching users.
Biojava genome migration to junit5
PR Build
#171:
Pull request
#1126
synchronize by
arkanar611
Action required
arkanar611:biojava-genome-migration-to-junit5
arkanar611:biojava-genome-migration-to-junit5
Action required
View #1126
View workflow file
Bump com.fasterxml.jackson.core:jackson-databind from 2.13.4.2 to 2.18.9 in /biojava-structure
PR Build
#169:
Pull request
#1130
opened by
dependabot
Bot
26m 9s
dependabot/maven/biojava-structure/com.fasterxml.jackson.core-jackson-databind-2.18.9
dependabot/maven/biojava-structure/com.fasterxml.jackson.core-jackson-databind-2.18.9
26m 9s
View #1130
View workflow file
Bugfix: parsing of mmCIF files with empty database_PDB_rev.date
PR Build
#168:
Pull request
#1129
opened by
josemduarte
17m 38s
jd/cifparse-empty-revdate
jd/cifparse-empty-revdate
17m 38s
View #1129
View workflow file
Bump com.fasterxml.jackson.core:jackson-databind from 2.13.4.2 to 2.22.0 in /biojava-structure
PR Build
#167:
Pull request
#1128
opened by
dependabot
Bot
8m 24s
dependabot/maven/biojava-structure/com.fasterxml.jackson.core-jackson-databind-2.22.0
dependabot/maven/biojava-structure/com.fasterxml.jackson.core-jackson-databind-2.22.0
8m 24s
View #1128
View workflow file
Biojava genome migration to junit5
PR Build
#165:
Pull request
#1126
opened by
arkanar611
9m 5s
arkanar611:biojava-genome-migration-to-junit5
arkanar611:biojava-genome-migration-to-junit5
9m 5s
View #1126
View workflow file
Issue 1038 - Test was refactored by using junit5 features
PR Build
#164:
Pull request
#1125
opened by
arkanar611
9m 7s
arkanar611:ISSUE-1038-Test-refactoring
arkanar611:ISSUE-1038-Test-refactoring
9m 7s
View #1125
View workflow file
Bump org.apache.logging.log4j:log4j-core from 2.25.3 to 2.25.4
PR Build
#163:
Pull request
#1124
opened by
dependabot
Bot
2h 9m 55s
dependabot/maven/org.apache.logging.log4j-log4j-core-2.25.4
dependabot/maven/org.apache.logging.log4j-log4j-core-2.25.4
2h 9m 55s
View #1124
View workflow file
Update guava dependency version to 33.6.0-jre
PR Build
#162:
Pull request
#1123
opened by
heuermh
18m 49s
heuermh:guava-33.6.0-jre
heuermh:guava-33.6.0-jre
18m 49s
View #1123
View workflow file
Bump org.apache.logging.log4j:log4j-core from 2.23.1 to 2.25.3
PR Build
#161:
Pull request
#1122
opened by
dependabot
Bot
18m 16s
dependabot/maven/org.apache.logging.log4j-log4j-core-2.25.3
dependabot/maven/org.apache.logging.log4j-log4j-core-2.25.3
18m 16s
View #1122
View workflow file
Fix #1079: fix SonarQube S1155 issues
PR Build
#160:
Pull request
#1121
opened by
Pasjonat90D
15m 50s
Pasjonat90D:issue-1079-improvements
Pasjonat90D:issue-1079-improvements
15m 50s
View #1121
View workflow file
Quaternary symmetry calculation edge-case
PR Build
#159:
Pull request
#1120
opened by
josemduarte
15m 24s
sym-edgecase
sym-edgecase
15m 24s
View #1120
View workflow file
Fix #1079: Use isEmpty() instead of size() == 0
PR Build
#158:
Pull request
#1119
opened by
Pasjonat90D
24m 46s
Pasjonat90D:fix/use-isempty-instead-of-size-#1079
Pasjonat90D:fix/use-isempty-instead-of-size-#1079
24m 46s
View #1119
View workflow file
Fix RSPEC-1940 boolean checks
PR Build
#157:
Pull request
#1118
opened by
JayKamsu
17m 9s
JayKamsu:fix-rspec-1940-booleans
JayKamsu:fix-rspec-1940-booleans
17m 9s
View #1118
View workflow file
Don't output label_seq_id for non-polymers in mmCIF writing
PR Build
#156:
Pull request
#1117
opened by
josemduarte
16m 21s
jd/issue1116
jd/issue1116
16m 21s
View #1117
View workflow file
Switch to new maven central plugin
PR Build
#155:
Pull request
#1115
opened by
josemduarte
14m 36s
jd/mvncentralplugin
jd/mvncentralplugin
14m 36s
View #1115
View workflow file
You can’t perform that action at this time.