Skip to content
Navigation Menu
Sign in
Appearance settings
Platform
AI CODE CREATION
GitHub Copilot
Write better code with AI
GitHub Copilot app
Direct agents from issue to merge
MCP Registry
Integrate external tools
DEVELOPER WORKFLOWS
Actions
Automate any workflow
Codespaces
Instant dev environments
Issues
Plan and track work
Code Review
Manage code changes
Code Quality
Enforce quality at merge
APPLICATION SECURITY
GitHub Advanced Security
Find and fix vulnerabilities
Code security
Secure your code as you build
Secret protection
Stop leaks before they start
EXPLORE
Why GitHub
Documentation
Blog
Changelog
Marketplace
View all features
Solutions
BY COMPANY SIZE
Enterprises
Small and medium teams
Startups
Nonprofits
BY USE CASE
App Modernization
DevSecOps
DevOps
CI/CD
View all use cases
BY INDUSTRY
Healthcare
Financial services
Manufacturing
Government
View all industries
View all solutions
Resources
EXPLORE BY TOPIC
AI
Software Development
DevOps
Security
View all topics
EXPLORE BY TYPE
Customer stories
Events & webinars
Ebooks & reports
Business insights
GitHub Skills
SUPPORT & SERVICES
Documentation
Customer support
Community forum
Trust center
Partners
View all resources
Open Source
COMMUNITY
GitHub Sponsors
Fund open source developers
PROGRAMS
Security Lab
Maintainer Community
Accelerator
GitHub Stars
Archive Program
REPOSITORIES
Topics
Trending
Collections
Enterprise
ENTERPRISE SOLUTIONS
Enterprise platform
AI-powered developer platform
AVAILABLE ADD-ONS
GitHub Advanced Security
Enterprise-grade security features
Copilot for Business
Enterprise-grade AI features
Premium Support
Enterprise-grade 24/7 support
Pricing
Type
/
to search
Sign in
Sign up
Appearance settings
You signed in with another tab or window.
Reload
to refresh your session.
You signed out in another tab or window.
Reload
to refresh your session.
You switched accounts on another tab or window.
Reload
to refresh your session.
Dismiss alert
{{ message }}
Uh oh!
There was an error while loading.
Please reload this page
.
JavaMuller
/
biojava
Public
forked from
biojava/biojava
Notifications
You must be signed in to change notification settings
Fork
0
Star
0
Code
Pull requests
0
Actions
Projects
Security and quality
0
Insights
Additional navigation options
Code
Pull requests
Actions
Projects
Security and quality
Insights
Commits
Breadcrumbs
History for
biojava
biojava-alignment
on
release
User selector
All users
All time
Commit history
Commits on Jun 15, 2016
[maven-release-plugin]prepare release biojava-4.2.2
Jenkins
committed
a74758c
View commit details
Copy full SHA for a74758c
View code at this point
Browse repository at this point
[maven-release-plugin] rollback the release of biojava-4.2.2
Jenkins
committed
ebacfd7
View commit details
Copy full SHA for ebacfd7
View code at this point
Browse repository at this point
[maven-release-plugin]prepare for next development iteration
Jenkins
committed
f12dad9
View commit details
Copy full SHA for f12dad9
View code at this point
Browse repository at this point
[maven-release-plugin]prepare release biojava-4.2.2
Jenkins
committed
1dfb457
View commit details
Copy full SHA for 1dfb457
View code at this point
Browse repository at this point
[maven-release-plugin] rollback the release of biojava-4.2.2
Jenkins
committed
1648288
View commit details
Copy full SHA for 1648288
View code at this point
Browse repository at this point
[maven-release-plugin]prepare release biojava-4.2.2
Jenkins
committed
082919b
View commit details
Copy full SHA for 082919b
View code at this point
Browse repository at this point
Commits on May 3, 2016
[maven-release-plugin] prepare for next development iteration
josemduarte
committed
c726b74
View commit details
Copy full SHA for c726b74
View code at this point
Browse repository at this point
[maven-release-plugin] prepare release biojava-4.2.1
josemduarte
committed
8504664
View commit details
Copy full SHA for 8504664
View code at this point
Browse repository at this point
[maven-release-plugin] rollback the release of biojava-4.2.1
josemduarte
committed
9c4091a
View commit details
Copy full SHA for 9c4091a
View code at this point
Browse repository at this point
[maven-release-plugin] prepare release biojava-4.2.1
josemduarte
committed
337ea1a
View commit details
Copy full SHA for 337ea1a
View code at this point
Browse repository at this point
Commits on Mar 25, 2016
Setting 4.2.1-SNAPSHOT in all other poms
Show description for de60308
sbliven
committed
de60308
View commit details
Copy full SHA for de60308
View code at this point
Browse repository at this point
Commits on Mar 10, 2016
[maven-release-plugin] prepare release biojava-4.2.0
andreasprlic
committed
e248837
View commit details
Copy full SHA for e248837
View code at this point
Browse repository at this point
Light cleanup:
Show description for 38fbae1
sbliven
committed
38fbae1
View commit details
Copy full SHA for 38fbae1
View code at this point
Browse repository at this point
Running spacestotabs on recent changes
Show description for 5074cb2
sbliven
committed
5074cb2
View commit details
Copy full SHA for 5074cb2
View code at this point
Browse repository at this point
Commits on Mar 9, 2016
Merge branch 'master' into removeLoadChemCompInfo
Show description for d1b5c48
josemduarte
committed
d1b5c48
View commit details
Copy full SHA for d1b5c48
View code at this point
Browse repository at this point
Removing unnecessary casts
sbliven
committed
38934ac
View commit details
Copy full SHA for 38934ac
View code at this point
Browse repository at this point
More whitespace fixes
sbliven
committed
af59f90
View commit details
Copy full SHA for af59f90
View code at this point
Browse repository at this point
Removing unused imports
sbliven
committed
e6b0dcc
View commit details
Copy full SHA for e6b0dcc
View code at this point
Browse repository at this point
Converting initial spaces to tabs.
Show description for 2417c23
sbliven
committed
2417c23
View commit details
Copy full SHA for 2417c23
View code at this point
Browse repository at this point
Remove trailing whitespace globally from .java files
Show description for 809312e
sbliven
committed
809312e
View commit details
Copy full SHA for 809312e
View code at this point
Browse repository at this point
Update to remove docstring
abradle
committed
7affe5b
View commit details
Copy full SHA for 7affe5b
View code at this point
Browse repository at this point
Merge remote-tracking branch 'upstream/master' into removeLoadChemCompInfo
josemduarte
committed
892c03d
View commit details
Copy full SHA for 892c03d
View code at this point
Browse repository at this point
Merge pull request #427 from abradle/master
Show description for b6b0525
josemduarte
committed
b6b0525
View commit details
Copy full SHA for b6b0525
View code at this point
Browse repository at this point
Commits on Mar 8, 2016
Fixing a few bugs that arose after loadChemCompInfo removal, #426
Show description for 8da9d07
josemduarte
committed
8da9d07
View commit details
Copy full SHA for 8da9d07
View code at this point
Browse repository at this point
Create a test for issue #288 sub-optimal MSA
Show description for e449976
lafita
committed
e449976
View commit details
Copy full SHA for e449976
View code at this point
Browse repository at this point
Commits on Mar 7, 2016
Updates to make serializable for Spark
abradle
committed
d85e331
View commit details
Copy full SHA for d85e331
View code at this point
Browse repository at this point
Commits on Jan 26, 2016
Making demos compile but not package into jar #387
josemduarte
committed
5737713
View commit details
Copy full SHA for 5737713
View code at this point
Browse repository at this point
Commits on Jan 15, 2016
Fix typo in GuideTreeTest
lafita
committed
6c4fbc1
View commit details
Copy full SHA for 6c4fbc1
View code at this point
Browse repository at this point
Fix broken GuideTreeTest
Show description for e134daf
lafita
committed
e134daf
View commit details
Copy full SHA for e134daf
View code at this point
Browse repository at this point
Commits on Jan 14, 2016
Merge branch 'master' into phylo
lafita
committed
ed7ab8f
View commit details
Copy full SHA for ed7ab8f
View code at this point
Browse repository at this point
Commits on Jan 12, 2016
Adding license to sub-poms
sbliven
committed
508ff37
View commit details
Copy full SHA for 508ff37
View code at this point
Browse repository at this point
Commits on Dec 1, 2015
Unifying forester version to main pom.xml
sbliven
committed
a7a0bda
View commit details
Copy full SHA for a7a0bda
View code at this point
Browse repository at this point
Commits on Nov 17, 2015
Generalize the GuideTree calculation using phylo
lafita
committed
9ca9ce3
View commit details
Copy full SHA for 9ca9ce3
View code at this point
Browse repository at this point
Switch phylo and alignment dependencies back
lafita
committed
45a66c7
View commit details
Copy full SHA for 45a66c7
View code at this point
Browse repository at this point
Commits on Nov 16, 2015
Merge remote-tracking branch 'main/master' into symmphylo
lafita
committed
5d200f2
View commit details
Copy full SHA for 5d200f2
View code at this point
Browse repository at this point
Previous
Next
You can’t perform that action at this time.