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Gaius-Augustus

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  1. BRAKER BRAKER Public

    BRAKER is a pipeline for fully automated prediction of protein coding gene structures with GeneMark-ES/ET/EP/ETP and AUGUSTUS in novel eukaryotic genomes

    Perl 467 90

  2. Augustus Augustus Public

    Genome annotation with AUGUSTUS

    C++ 341 118

  3. GALBA GALBA Public

    GALBA is a pipeline for fully automated prediction of protein coding gene structures with AUGUSTUS in novel eukaryotic genomes for the scenario where high quality proteins from one or several close…

    Perl 149 7

  4. Tiberius Tiberius Public

    Tiberius is a deep learning gene finder.

    Python 139 15

  5. BRAKER4 BRAKER4 Public

    BRAKER re-implemented with snakemake

    Python 84 14

  6. TSEBRA TSEBRA Public

    Forked from LarsGab/TSEBRA

    TSEBRA: Transcript Selector for BRAKER

    Python 53 4

Repositories

Showing 10 of 27 repositories
  • Vipsania Public

    Unsupervised Deep Gene Finding

    Gaius-Augustus/Vipsania's past year of commit activity
    Python 21 MIT 0 2 1 Updated Sep 16, 2026
  • learnMSA Public

    Learning and Aligning Large Protein Families with support of protein language models.

    Gaius-Augustus/learnMSA's past year of commit activity
    Python 33 MIT 6 3 0 Updated Sep 16, 2026
  • bricks2marble Public

    Pre- and postprocessing tools for genome annotation.

    Gaius-Augustus/bricks2marble's past year of commit activity
    Python 4 MIT 0 3 1 Updated Sep 14, 2026
  • Tiberius Public

    Tiberius is a deep learning gene finder.

    Gaius-Augustus/Tiberius's past year of commit activity
    Python 139 MIT 15 22 0 Updated Sep 11, 2026
  • Drusilla Public
    Gaius-Augustus/Drusilla's past year of commit activity
    Python 1 MIT 0 0 0 Updated Sep 7, 2026
  • BRAKER4 Public

    BRAKER re-implemented with snakemake

    Gaius-Augustus/BRAKER4's past year of commit activity
    Python 84 MIT 14 36 3 Updated Sep 3, 2026
  • hidten-docs Public

    Documentation for HidTen

    Gaius-Augustus/hidten-docs's past year of commit activity
    HTML 0 0 0 0 Updated Aug 25, 2026
  • GALBA2 Public

    Snakemake port of the original Galba pipeline

    Gaius-Augustus/GALBA2's past year of commit activity
    Python 12 MIT 1 1 0 Updated Jul 28, 2026
  • pyVARUS Public

    Python implementation of VARUS for RNA-Seq download/sampling/alignment

    Gaius-Augustus/pyVARUS's past year of commit activity
    Python 1 GPL-3.0 0 0 0 Updated Jun 23, 2026
  • VARUS Public

    RNA-Seq sampling

    Gaius-Augustus/VARUS's past year of commit activity
    C++ 11 3 6 0 Updated Jun 23, 2026
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